CAGED and BEST
Harvard Medical School and Boston Children's Hospital, USA
Marco Ramoni and his team at Harvard and Boston Children's Hospital used LispWorks to develop both CAGED and BEST.
CAGED (Cluster Analysis of Gene Expression Dynamics) is a program for the analysis of temporal profiles of gene expression data. CAGED is distributed free of charge to academic and non-profit organisations. BEST (Best Enumeration of SNP Tags) is a program designed to identify the minimum set of SNPs tagging an haplotype block.
The CAGED analysis screen
The CAGED analysis screen collects the user's preferences about the upcoming analysis and displays a preview of the just loaded database.